Thesis

195 Dynamics of methylated cell-free DNA in the urine of non-small cell lung cancer patients 31. Fitzmaurice GM, Ravichandran C. A primer in longitudinal data analysis. Circulation. 2008;118(19):2005-10. 32. Ranganathan P, Pramesh CS, Aggarwal R. Common pitfalls in statistical analysis: Measures of agreement. Perspect Clin Res. 2017;8(4):187-91. 33. Ripley BD. Stochastic Simulation. New York: Wiley; 1987 1987//. 34. Fox J, Weisberg S. An R companion to applied regression. 2nd edition ed. Los Angeles: SAGE; 2011. 35. Peterson RA, Cavanaugh JE. Ordered quantile normalization: a semiparametric transformation built for the cross-validation era. Journal of Applied Statistics. 2020;47(13-15):2312-27. 36. Lüdecke D. Data visualization for statistics in social science. 2019. 37. Wickham H. Ggplot2: Elegant Graphics for Data Analysis. 2nd ed: Springer Publishing Company Incorporated; 2009. 38. Sarkar D. Lattice: Multivariate Data Visualization with R2008. 39. Meddeb R, Dache ZAA, Thezenas S, Otandault A, Tanos R, Pastor B, et al. Quantifying circulating cell-free DNA in humans. Sci Rep. 2019;9(1):5220. 40. Xie J, Yang J, Hu P. Correlations of Circulating Cell-Free DNA With Clinical Manifestations in Acute Myocardial Infarction. Am J Med Sci. 2018;356(2):121-9. 41. Streleckiene G, Reid HM, Arnold N, Bauerschlag D, Forster M. Quantifying cell free DNA in urine: comparison between commercial kits, impact of gender and inter-individual variation. Biotechniques. 2018;64(5):225-30. 42. Bach S, Paulis I, Sluiter NR, Tibbesma M, Martin I, van de Wiel MA, et al. Detection of colorectal cancer in urine using DNA methylation analysis. Sci Rep. 2021;11(1):2363. 43. Chiarella P, Carbonari D, Capone P, Cavallo D, Iavicoli S, Mansi A, et al. Susceptibility biomarker detection in urine exfoliate DNA. Biomark Med. 2017;11(11):957-66. 44. Koo TK, Li MY. A Guideline of Selecting and Reporting Intraclass Correlation Coefficients for Reliability Research. J Chiropr Med. 2016;15(2):155-63. 45. Wang J, Bai H, Hong C, Wang J, Mei TH. Analyzing epidermal growth factor receptor mutation status changes in advanced non-small-cell lung cancer at different sampling time-points of blood within one day. Thorac Cancer. 2017;8(4):312-9. 46. Hubers AJ, Heideman DA, Herder GJ, Burgers SA, Sterk PJ, Kunst PW, et al. Prolonged sampling of spontaneous sputum improves sensitivity of hypermethylation analysis for lung cancer. J Clin Pathol. 2012;65(6):541-5. 47. Zuiverloon TC, Tjin SS, Busstra M, Bangma CH, Boeve ER, Zwarthoff EC. Optimization of nonmuscle invasive bladder cancer recurrence detection using a urine based FGFR3 mutation assay. J Urol. 2011;186(2):707-12. 48. Aziz N, Detels R, Quint JJ, Gjertson D, Ryner T, Butch AW. Biological variation of immunological blood biomarkers in healthy individuals and quality goals for biomarker tests. BMC Immunol. 2019;20(1):33. 7

RkJQdWJsaXNoZXIy MjY0ODMw